Bash

In this section, we will build several native bash applets that will increase in complexity:

1. An applet that takes an input files, runs a single Unix command, and returns the result as a file.

2. An applet that includes a binary executable file in the resources directory.

3. An applet that installs the dependency cnvkit at runtime and then as an asset.

4. An applet that runs samtools.

In order to kill a job/ workflow/ app/applet you will need to terminate the job/ analysis. Please use dx terminate or terminate in the Monitor tab in the UI.