> For the complete documentation index, see [llms.txt](https://academy.dnanexus.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform.md).

# Public Datasets on the DNAnexus Platform

- [Single Cell](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/single-cell.md)
- [Tahoe-100M](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/single-cell/tahoe-100m.md)
- [nf-core/scrnaseq](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/single-cell/nf-core-scrnaseq.md)
- [nf-core/scdownstream](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/single-cell/nf-core-scdownstream.md)
- [scvi-tools and CZ CELLxGENE](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/single-cell/scvi-tools-and-cz-cellxgene.md)
- [CELLxGENE Annotate](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/single-cell/cellxgene-annotate.md)
- [Molecular Modeling](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/molecular-modeling.md)
- [nf-core: Proteinfold](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/molecular-modeling/nf-core-proteinfold.md)
- [eMol\* Visualization User Guide](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/molecular-modeling/emol-visualization-user-guide.md)
- [Protein Data Bank (PDB) Curation](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/molecular-modeling/protein-data-bank-pdb-curation.md)
- [AlphaFold2](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/molecular-modeling/alphafold2.md)
- [Target Validation](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/target-validation.md)
- [Open Targets](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/target-validation/open-targets.md)
- [The Genotype-Tissue Expression (GTEx) Dataset](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/target-validation/the-genotype-tissue-expression-gtex-dataset.md)
- [The LINCS L1000 dataset](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/target-validation/the-lincs-l1000-dataset.md)
- [Pathway Enrichment Analysis](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/target-validation/pathway-enrichment-analysis.md)
- [Validation Ready Accelerator](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/validation-ready-accelerator.md)
- [Running nf-core/variantbenchmarking on DNAnexus](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/validation-ready-accelerator/running-nf-core-variantbenchmarking-on-dnanexus.md)
- [Genome in a Bottle (GIAB)](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/validation-ready-accelerator/genome-in-a-bottle-giab.md)
- [SEQC2 Somatic Mutation Reference Call Set](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/validation-ready-accelerator/seqc2-somatic-mutation-reference-call-set.md)
- [gnomAD (sites only) – for DNA variant filtering in clinical pipelines](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/validation-ready-accelerator/gnomad-sites-only-for-dna-variant-filtering-in-clinical-pipelines.md)
- [ClinVar](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/validation-ready-accelerator/clinvar.md)
- [AI/ML Experience Accelerator](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/ai-ml-experience-accelerator.md)
- [Tahoe-x1 foundation model for perturbation prediction](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/ai-ml-experience-accelerator/tahoe-x1-foundation-model-for-perturbation-prediction.md)
- [NVIDIA BioNeMo pretrained model weights: ESM-2, Evo-2, Geneformer](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/ai-ml-experience-accelerator/nvidia-bionemo-pretrained-model-weights-esm-2-evo-2-geneformer.md)
- [CSV Builders for Nextflow Pipelines](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/csv-builders-for-nextflow-pipelines.md)
- [CSV Builder for scrnaseq](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/csv-builders-for-nextflow-pipelines/csv-builder-for-scrnaseq.md)
- [CSV Builder for nf-core/proteinfold](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/csv-builders-for-nextflow-pipelines/csv-builder-for-nf-core-proteinfold.md)
- [Technical Considerations](https://academy.dnanexus.com/public-datasets-on-the-dnanexus-platform/csv-builders-for-nextflow-pipelines/technical-considerations.md)